Recent Publications

2023

  1. Aberasturi, D. T., Piegorsch, W. W., Bedrick E. J., & Lussier, Y. A. (2023). Accounting for extra‐binomial variability with differentially expressed genetic pathway data: A collaborative bioinformatic study. Stat, 12(1), e518.
  2. Armin, J. S., Williamson, H. J., Rothers, J., Lee, M. S., & Baldwin, J. A. (2023). An Adapted Cancer Screening Education Program for Native American Women With Intellectual and Developmental Disabilities and Their Caregivers: Protocol for Feasibility and Acceptability Testing. JMIR Research Protocols, 12(1), e37801.
  3. Baranski, E., Lindberg, C., Gilligan, B., Fisher, J. M., Canada, K., Heerwagen, J., ... & Mehl, M. R. (2023). Personality, workstation type, task focus, and happiness in the workplace. Journal of Research in Personality, 103, 104337.
  4. Bleecker, E. R., Meyers, D. A., Billheimer, D., Li, H., Newbold, P., Kwiatek, J., ... & Li, X. (2023). Clinical Implications of Longitudinal Blood Eosinophil Counts in Patients With Severe Asthma. The Journal of Allergy and Clinical Immunology: In Practice.
  5. Burgess, J. L., Fisher, J. M., Nematollahi, A., Jung, A. M., Calkins, M. M., Graber, J. M., ... & Caban‐Martinez, A. J. (2023). Serum per‐and polyfluoroalkyl substance concentrations in four municipal us fire departments. American Journal of Industrial Medicine, 66(5), 411-423.
  6. Camarena, J. L., Hawkes, B., Bedrick E., & Ellingson, K. (2023, December). 2213. History of Infection and Worry about COVID-19 Drive Antibiotic Use for “Flu-or COVID-like” Symptoms in the United States and Mexico during the Pandemic. In Open Forum Infectious Diseases (Vol. 10, No. Supplement_2, pp. ofad500-1835). US: Oxford University Press.
  7. Corenblum, M. J., McRobbie-Johnson, A., Carruth, E., Bernard, K., Luo, M., Mandarino, L. J., Peterson, S., Billheimer, D., ... & Madhavan, L. (2023). Parallel Neurodegenerative Phenotypes in Sporadic Parkinsons Disease Fibroblasts and Midbrain Dopamine Neurons. bioRxiv, 2023-02.
  8. Elmobdy, K., Maibach, J., Maibach, H., & Do, L. H. D. (2023). Long-Term North American Trend in Patch Test Reactions: A 32-Year Statistical Overview (1984–2016). Dermatitis.
  9. Fisher, J. M., Subbian, V., Pungitore, S., Bedrick E. J., & Mosier, J. M. (2023). Acute Respiratory Failure From Early Pandemic COVID-19: Noninvasive Respiratory Support vs Mechanical Ventilation. CHEST Critical Care, 100030. Full text.
  10. Frost, K. L., Jilek, J. L., Sinari, S., Klein, R. R., Billheimer, D., Wright, S. H., & Cherrington, N. J. (2023). Renal Transporter Alterations in Patients with Chronic Liver Diseases: Nonalcoholic Steatohepatitis, Alcohol-Associated, Viral Hepatitis, and Alcohol-Viral Combination. Drug Metabolism and Disposition, 51(2), 155-164.
  11. Gephart, S. M., Fleiner, M., Msowoya, A., & Rothers, J. (2023). Prediction of GutCheckNEC and Its Relation to Severity of Illness and Measures of Deterioration in Necrotizing Enterocolitis. Advances in Neonatal Care, 10-1097. PubMed PMID: 37339581.
  12. Gilles, G., Vohra, A., Robles, D., Taljanovic, M. S., Ashbeck, E. L., Caruso, C., ..., Bedrick E.J., ... & Kwoh, C. K. (2023). Reliability and Validity of Single Axial Slice vs. Multiple Slice Quantitative Measurement of the Volume of Effusion-Synovitis on 3T Knee MRI in Knees with Osteoarthritis. Journal of Clinical Medicine, 12(7), 2691.
  13. Guerra, S., Ledford, J. G., Melén, E., Lavi, I., Carsin, A. E., Stern, D. A., ..., Billheimer, D., ..., & Anto, J. M. (2023). Creatine kinase is decreased in childhood asthma. American Journal of Respiratory and Critical Care Medicine, 207(5), 544-552.
  14. Gunn-Sandell, L. B., Bedrick E. J., Hutchins, J. L., Berg, A. A., Kaizer, A. M., & Carlson, N. E. (2024). A practical guide to adopting Bayesian analyses in clinical research. Journal of Clinical and Translational Science, 8(1), e3.
  15. Hara, A., Lu, E., Johnstone, L., Wei, M., Sun, S., Hallmark, B., ... & Chilton, F. H. (2023). Identification of an allele-specific transcription factor binding interaction that regulates PLA2G2A gene expression. bioRxiv, 2023-12.
  16. Hollister, J., Caban-Martinez, A. J., Ellingson, K. D., Beitel, S., Fowlkes, A. L., Lutrick, K., ..., Fisher, J.M., ... & Burgess, J. L. (2023). Serum per-and polyfluoroalkyl substance concentrations and longitudinal change in post-infection and post-vaccination SARS-CoV-2 antibodies. Environmental research, 239, 117297.
  17. Honan, J., Ingram, M., Quijada, C., Chaires, M., Fimbres, J., Ornelas, C., ... Billheimer, D.,... & Beamer, P. (2023). Understanding the impacts of the COVID-19 pandemic on small businesses and workers using quantitative and qualitative methods. Annals of Work Exposures and Health, 67(1), 87-100.
  18. Jergović, M., Watanabe, M., Bhat, R., Coplen, C. P., Sonar, S. A., Wong, R., ..., LaFleur, B., ... & Nikolich, J. Z. (2023). T-cell cellular stress and reticulocyte signatures, but not loss of naïve T lymphocytes, characterize severe COVID-19 in older adults. GeroScience, 1-16.
  19. Jung, A. M., Beitel, S. C., Gutenkunst, S. L., Billheimer, D., Jahnke, S. A., Littau, S. R., ... & Burgess, J. L. (2023). Excretion of polybrominated diphenyl ethers and AhR activation in breastmilk among firefighters. Toxicological Sciences, 192(2), 223-232.
  20. Koska, J., Furtado, J., Hu, Y., Billheimer, D., Allison, M., Budoff, M., ... & Reaven, P. (2023). 449-P: Truncations of Apolipoproteins CI and C-II Are Associated with Coronary Artery Calcium Progression in Multiethnic Study of Atherosclerosis (MESA). Diabetes, 72(Supplement_1).
  21. Koska, J., Furtado, J., Hu, Y., Nedelkov, D., Billheimer, D., Budoff, M., ... & Reaven, P (2023). 156-OR: Apolipoprotein C-II Posttranslational Truncation Is Associated with Reduced Incident Cardiovascular Risk in Multiethnic Study of Atherosclerosis (MESA). Diabetes, 72(Supplement_1).
  22. Koska, J., Hu, Y., Furtado, J., Billheimer, D., Nedelkov, D., Allison, M., ... & Reaven, P. (2023). Association of apolipoproteins CI and C-II truncations with coronary heart disease and progression of coronary artery calcium: Multi-Ethnic Study of Atherosclerosis. Atherosclerosis, 380, 117214.
  23. Kwoh, C. K., Roemer, F., Guermazi, A., & Ashbeck, E. (2023). POS0108 WOMAC KNEE PAIN: DOES IT WALK THE WALK?. Full text.
  24. LaFleur, B. J., White, L., Dake, M. D., Nikolich, J. Z., Sprissler, R., & Bhattacharya, D. (2023). No evidence that analgesic use after COVID-19 vaccination negatively impacts antibody responses. ImmunoHorizons, 7(12), 834-841. PubMed PMID: 38085168.
  25. LaFleur, B., Curiel-Lewandrowski, C., Tapia, E., Parker, J., White, L., Chow, H. S., & South, A. P. (2023). Characterizing dermal transcriptional change in the progression from sun-protected skin to actinic keratosis. The Journal of investigative dermatology, 143(7), 1299. PubMed PMID: 36708948.
  26. Li, H., & Li, X. (2023). Genetic relationships between high blood eosinophil count, asthma susceptibility, and asthma severity. Journal of Asthma, 1-13. PubMed PMID: 37560908.
  27. Li, H., Castro, M., Denlinger, L. C., Erzurum, S. C., Fahy, J. V., Gaston, B., ... & NHLBI Severe Asthma Research Program (SARP). (2023). Investigations of a combination of atopic status and age of asthma onset identify asthma subphenotypes. Journal of Asthma, 1-10. PubMed PMID: 36940238.
  28. Li, X., Guerra, S., Ledford, J. G., Kraft, M., Li, H., Hastie, A. T., ... & Bleecker, E. R. (2023). Low CC16 mRNA expression levels in bronchial epithelial cells are associated with asthma severity. American journal of respiratory and critical care medicine, 207(4), 438-451.
  29. Li, X., Li, H., Christenson, S. A., Castro, M., Denlinger, L. C., Erzurum, S. C., ... & NHLBI Severe Asthma Research Program (SARP). (2023). Genetic analyses of chr11p15. 5 region identify MUC5AC-MUC5B associated with asthma-related phenotypes. Journal of Asthma, 1-12.
  30. Lim, E., Davis, J., Prabhudesai, D., & Taira, D. (2023). Inventory of Survey Databases for Native Hawaiian, Pacific Islander, and Filipino Health Disparities Research. Hawai'i Journal of Health & Social Welfare, 82(10 Suppl 1), 104.
  31. Liu, S., Roemer, F., Ge, Y., Bedrick E. J., Li, Z. M., Guermazi, A., ... & Sun, X. (2023). Comparison of evaluation metrics of deep learning for imbalanced imaging data in osteoarthritis studies. Osteoarthritis and Cartilage.
  32. Lopez-Pentecost, M., Hallmark, B., Thomson, C. A., Chilton, F., & Garcia, D. O. (2023). Association between Dietary Fatty Acid Intake and Liver Steatosis and Fibrosis in a Sample of Mexican-Origin Hispanic Adults with Overweight or Obesity. International Journal of Environmental Research and Public Health, 20(4), 3103.
  33. Lu, M., Yamane, K., Keahi, D., Tong, M., Goo, C., Prabhudesai, D., ... & Liow, K. (2023). Different Experiences in Chronic Migraine Etiology, Treatment and Comorbidities of Hawaii’s Ethnic Groups (P14-12.006).
  34. Mosier, J. M., Nayebi, A., Fisher, J. M., & Subbian, V. (2023). Predicting Failure of Noninvasive Respiratory Support Using Deep Recurrent Learning. Respiratory Care, 68(4), 488-496.
  35. Mosier, J., Subbian, V., Pungitore, S., Prabhudesai, D., Bedrick E., Stocking, J., & Fisher, J. (2023). Noninvasive vs Invasive Respiratory Support for Patients with Acute Hypoxemic Respiratory Failure. medRxiv, 2023-12. PubMed PMID: 38234784.
  36. Ozgur, E., Blanche, P. A., Bedrick E. J., Conway, M. D., Peyman, G. A., & Peyghambarian, N. N. (2023). Accuracy of an objective binocular automated phoropter for providing spectacle prescriptions. Clinical and Experimental Optometry, 1-6.
  37. Porter, W. T., Gade, L., Montfort, P., Mihaljevic, J. R., Bowers, J. R., Willman, A., ... LaFleur, B., ...& Engelthaler, D. M. (2024). Understanding the exposure risk of aerosolized Coccidioides in a Valley fever endemic metropolis. Scientific Reports, 14(1), 1311.
  38. Prabhudesai, D., Chen, J. J., & Lim, E. (2023). Evaluation of Access to Care Barriers and Their Effect on General Health Status Among Native Hawaiian and Pacific Islander Adults. Journal of Racial and Ethnic Health Disparities, 10(3), 1178-1186. PubMed PMID: 35445925.
  39. Quirk, G. E., Schoenle, M. V., Peyton, K. L., Uhrlaub, J. L., Lau, B., Burgess, J. L., ..., LaFleur, B., ... & Bhattacharya, D. (2023). Determinants of de novo B cell responses to drifted epitopes in post-vaccination SARS-CoV-2 infections. medRxiv.
  40. Quirk, G., Schoenle, M. V., Peyton, K. L., Uhrlaub, J. L., Lau, B., Burgess, J., ..., LaFleur, B., ... & Bhattacharya, D. (2023). Determinants of de novo B cell responses to drifted epitopes in post-vaccination SARS-CoV-2 infections (preprint).
  41. Ramírez, D. M., Gutenkunst, S., Honan, J., Ingram, M., Quijada, C., Chaires, M., ..., Billheimer, D., ... & Beamer, P. I. (2023). Thinking on your feet: Beauty and auto small businesses maneuver the risks of the COVID-pandemic. Promoting Health Equity During a Pandemic: Approaches to Address Vaccination Burden and Health Inequities Amongst Under-Served Populations in US and Mexico, 98.
  42. Ramírez, D. M., Gutenkunst, S., Lothrop, N., Quijada, C., Chaires, M., Cortez, I., ..., Billheimer, D., ... & Beamer, P. I. (2023). What a mix! Volatile organic compounds and worker exposure in small business beauty salons in Tucson, Arizona. Frontiers in Public Health, 11.
  43. Rothers, J. L., Calton, C. M., Stepp, J. M., & Halpern, M. D. (2023). Enteral Feeding and Antibiotic Treatment Do Not Influence Increased Coefficient of Variation of Total Fecal Bile Acids in Necrotizing Enterocolitis. Newborn (Clarksville, Md.), 2(2), 128. PubMed PMID: 37559695.
  44. Sans-Fuentes, M., Sierra, L. A., Cruz, N. S., Rubio, V., Lutrick, K., Hamm, K., ...Billheimer, D.,... & Parthasarathy, S. (2023). Temporal Changes in Vaccine-Specific Willingness Across Race/Ethnicity Following Serious Adverse Event Reports. American Journal of Public Health, (0), e1-e4. PubMed PMID: 37944076.
  45. Sarwar, S., Tome, M. E., Billheimer, D., Spier, C., Smith, C. L., Persky, D., & Schmelz, M. (2023). Optimizing assessment of CD30 expression in Hodgkin lymphoma by controlling for low expression. Histology and Histopathology, 18644-18644.
  46. Scott, A. M., Lim, J. R., Randhawa, R., Lee, J., Yaddanapudi, K., Rabe, B., & Malo, J. (2023). Examining Miliary Disease Etiology in a Coccidioides-Endemic Center: A Retrospective Cohort Study. Journal of Fungi, 10(1), 29.
  47. Sinari, S., Koska, J., Hu, Y., Furtado, J., Jensen, M. K., Budoff, M. J., ... Billheimer, D., ...& Reaven, P. (2023). ApoC-III Proteoforms, Plasma Lipids, and Cardiovascular Risk in MESA. Arteriosclerosis, Thrombosis, and Vascular Biology.
  48. Sridhara, S., Gungor, A. B., Erol, H. K., Al-Obaidi, M., Zangeneh, T. T., Bedrick E. J., ... & Tanriover, B. (2023). Lack of effectiveness of Bebtelovimab monoclonal antibody among high-risk patients with SARS-Cov-2 Omicron during BA. 2, BA. 2.12. 1 and BA. 5 subvariants dominated era. Plos one, 18(4), e0279326.
  49. Srinivasan, J., Vasudev, A., Shasha, C., Selden, H. J., Perez Jr, E., LaFleur, B., ... & Ehrlich, L. I. (2023). The initial age‐associated decline in early T‐cell progenitors reflects fewer pre‐thymic progenitors and altered signals in the bone marrow and thymus microenvironments. Aging Cell.
  50. Yang, C., Veenstra, J., Bartz, T. M., Pahl, M. C., Hallmark, B., Chen, Y. D. I., ... & Manichaikul, A. (2023). Genome-wide association studies and fine-mapping identify genomic loci for n-3 and n-6 polyunsaturated fatty acids in Hispanic American and African American cohorts. Communications biology, 6(1), 852.
  51. Yang, C., Veenstra, J., Bartz, T., Pahl, M., Hallmark, B., Chen, Y. D. I., ... & Manichaikul, A. (2023). Genome-Wide Association Studies and fine-mapping of genomic loci for n-3 and n-6 Polyunsaturated Fatty Acids in Hispanic American and African American Cohorts. Zhang, M., Liu, Y., Parker, J., An, L., & Sun, X. (2023). Flexible Analysis of Spatial Transcriptomics Data (FAST): A Deconvolution Approach. bioRxiv, 2023-05.
  52. Zhang, M., Liu, Y., Parker, J., An, L., & Sun, X. (2023). Flexible Analysis of Spatial Transcriptomics Data (FAST): A Deconvolution Approach. bioRxiv, 2023-05.

2022

  1. Al-Obaidi MM, Gungor AB, Nematollahi S, Zangeneh TT, Bedrick EJ, Johnson KM, Low-Adegbija NE, Alam R, Rangan P, William Heise C, Ariyamuthu VK. Effectiveness of Casirivimab-Imdevimab Monoclonal Antibody Treatment Among High-Risk Patients With Severe Acute Respiratory Syndrome Coronavirus 2 B. 1.617. 2 (Delta Variant) Infection. InOpen forum infectious diseases 2022 Jul (Vol. 9, No. 7, p. ofac186). Oxford University Press.
  2. Borden ES, Adams AC, Buetow KH, Wilson MA, Bauman JE, Curiel-Lewandrowski C, Chow HH, LaFleur BJ, Hastings KT. Shared gene expression and immune pathway changes associated with progression from nevi to melanoma. Cancers. 2022 Jan;14(1):3.
  3. Borden ES, Ghafoor S, Buetow KH, LaFleur BJ, Wilson MA, Hastings KT. NeoScore integrates characteristics of the neoantigen: MHC class I interaction and expression to accurately prioritize immunogenic neoantigens. The Journal of Immunology. 2022 Apr 1;208(7):1813-27.
  4. Burgess JL, Fisher JM, Nematollahi A, Jung AM, Calkins MM, Graber JM, Grant CC, Beitel SC, Littau SR, Gulotta JJ, Wallentine DD. Serum per‐and polyfluoroalkyl substance concentrations in four municipal us fire departments. American journal of industrial medicine. 2022 Jul 21.
  5. Chilton, F. H., Manichaikul, A., Yang, C., O'Connor, T. D., Johnstone, L. M., Blomquist, S., ... & Hallmark, B. (2022). Interpreting clinical trials with omega-3 supplements in the context of ancestry and FADS genetic variation. Frontiers in Nutrition8, 1227.
  6. Davidson S, Jahnke S, Jung AM, Burgess JL, Jacobs ET, Billheimer D, Farland LV. Anti-Müllerian Hormone Levels among Female Firefighters. International Journal of Environmental Research and Public Health. 2022 May 14;19(10):5981.
  7. Divo MJ, Marin JM, Casanova C, Cabrera Lopez C, Pinto-Plata VM, Marin-Oto M, Polverino F, de-Torres JP, Billheimer D, Celli BR. Comorbidities and mortality risk in adults younger than 50 years of age with chronic obstructive pulmonary disease. Respiratory Research. 2022 Dec;23(1):1-0.
  8. Donovan FM, Ramadan FA, Lim JR, Buchfuhrer JE, Khan RN, DeQuillfeldt NP, Davis NM, Kaveti A, De Shadarevian M, Bedrick EJ, Galgiani JN. Contribution of Biologic Response Modifiers to the Risk of Coccidioidomycosis Severity. InOpen Forum Infectious Diseases 2022 Mar (Vol. 9, No. 3, p. ofac032). US: Oxford University Press.
  9. Fisher JM, Jay AK. Jugular Foramen Lesions: What the Skull Base Surgeon Needs to Know. Journal of Neurological Surgery Part B: Skull Base. 2022 Feb;83(S 01):A096.
  10. Essay, P, Fisher JM, Mosier JM, Subbian V. Validation of an Electronic Phenotyping Algorithm for Patients With Acute Respiratory Failure. Critical care explorations. 2022 Mar;4(3). doi: 10.1097/CCE.0000000000000645. PMID: 35261979; PMCID: PMC8893296.
  11. Fisher J, Subbian V, Pungitore S, Bedrick E, Mosier J. Outcomes in Patients with Acute Hypoxemic Respiratory Failure Secondary to COVID-19 Treated with Noninvasive Respiratory Support versus Invasive Mechanical Ventilation. medRxiv. 2022:2022-12. doi: 10.1101/2022.12.19.22283704. PMID: 36597544; PMCID: PMC9810223.
  12. Fowlkes AL, Yoon SK, Lutrick K, Gwynn L, Burns J, Grant L, Phillips AL, Ellingson K, Ferraris MV, LeClair LB, Mathenge C…Bedrick EJ Effectiveness of 2-dose BNT162b2 (Pfizer BioNTech) mRNA vaccine in preventing SARS-CoV-2 infection among children aged 5–11 years and adolescents aged 12–15 years—PROTECT cohort, July 2021–February 2022. Morbidity and Mortality Weekly Report. 2022 Mar 3;71(11):422.
  13. Francisco D, Wang Y, Marshall C, Conway M, Addison KJ, Billheimer D, Kimura H, Numata M, Chu HW, Voelker DR, Kraft M. Small Peptide Derivatives Within the Carbohydrate Recognition Domain of SP-A2 Modulate Asthma Outcomes in Mouse Models and Human Cells. Frontiers in Immunology. 2022;13.
  14. Frost KL, Jilek JL, Thompson AD, Klein RR, Sinari S, Torabzedehkorasani E, Billheimer DD, Schnellmann RG, Cherrington NJ. Increased Renal Expression of Complement Components in Patients With Liver Diseases: Nonalcoholic Steatohepatitis, Alcohol-Associated, Viral Hepatitis, and Alcohol-Viral Combination. Toxicological Sciences. 2022 Sep;189(1):62-72.
  15. Frost KL, Jilek JL, Sinari S, Klein RR, Billheimer D, Wright SH, Cherrington NJ. Renal Transporter Alterations in Patients with Chronic Liver Diseases: Nonalcoholic Steatohepatitis, Alcohol-Associated, Viral Hepatitis, and Alcohol-Viral Combination. Drug Metabolism and Disposition. 2023 Feb 1;51(2):155-64.
  16. Garcia DO, Valdez LA, Aceves B, Bell ML, Rabe BA, Villavicencio EA, Marrero DG, Melton F, Hooker SP. mHealth-Supported Gender-and Culturally Sensitive Weight Loss Intervention for Hispanic Men With Overweight and Obesity: Single-Arm Pilot Study. JMIR Formative Research. 2022 Sep 21;6(9):e37637.
  17. Gilles G, Vohra A, Caruso C, Robles D, Taljanovic M, Duryea J, Ashbeck E, Bedrick E, Kwoh K. Reliability and Validity of Single Axial Slice vs. Multiple Slice Quantitative Measurement of the Volume of Effusion-Synovitis on 3T Knee MRI in Knees with Osteoarthritis. InARTHRITIS & RHEUMATOLOGY 2022 Sep 1 (Vol. 74, pp. 2417-2420). 111 RIVER ST, HOBOKEN 07030-5774, NJ USA: WILEY.
  18. Goff PH, Riolobos L, LaFleur BJ, Spraker MB, Seo YD, Smythe KS, Campbell JS, Pierce RH, Zhang Y, He Q, Kim EY. Neoadjuvant therapy induces a potent immune response to sarcoma, dominated by myeloid and B cells. Clinical Cancer Research. 2022 Apr 14;28(8):1701-11.’Guerra S, Ledford JG, Melén E, Lavi I, Carsin AE, Stern DA, Zhai J, Vidal M, Bustamante M, Addison KJ, Vallecillo RG. Creatine Kinase is Decreased in Childhood Asthma. American Journal of Respiratory and Critical Care Medicine. 2022 Jul 23(ja).
  19. Gutenkunst SL, Bell ML. Managing missing items in the Fagerström Test for Nicotine Dependence: a simulation study. BMC Medical Research Methodology. 2022 May 20;22(1):145. doi: 10.1186/s12874-022-01637-2. PubMed PMID: 35596136; PMCID: PMC9121580.
  20. Hergert DC, Sicard V, Stephenson DD, Reddy SP, Robertson-Benta CR, Dodd AB, Bedrick EJ, Gioia GA, Meier TB, Shaff NA, Quinn DK. Test–Retest Reliability of a Semi-Structured Interview to Aid in Pediatric Traumatic Brain Injury Diagnosis. Journal of the International Neuropsychological Society. 2022 Aug;28(7):687-99.
  21. Jergović M, Uhrlaub JL, Watanabe M, Bradshaw CM, White LM, LaFleur BJ, Edwards T, Sprissler R, Worobey M, Bhattacharya D, Nikolich-Žugich J. Competent immune responses to SARS-CoV-2 variants in older adults following two doses of mRNA vaccination. Nature Communications. 2022 May 24;13(1):2891.
  22. Kraft M, Richardson M, Hallmark B, Billheimer D, Van den Berge M, Fabbri LM, Van der Molen T, Nicolini G, Papi A, Rabe KF, Singh D. The role of small airway dysfunction in asthma control and exacerbations: a longitudinal, observational analysis using data from the ATLANTIS study. The Lancet Respiratory Medicine. 2022 Jul 1;10(7):661-8.
  23. Kraft M, Matthew R, Hallmark B, Billheimer D, van den Berge M, Fabbri L, Van der Molen T, Nicolini G, Papi A, Rabe KF, Singh D. Small Airway Dysfunction Predicts Asthma Control and Exacerbations: Longitudinal Data from the Assessment of Small Airways Involvement in Asthma (ATLANTIS) Study.
  24. Koska J, Furtado J, Hu Y, Sinari S, Budoff MJ, Billheimer D, Nedelkov D, McClelland RL, Reaven PD. Plasma proteoforms of apolipoproteins CI and C-II are associated with plasma lipids in the Multi-Ethnic Study of Atherosclerosis. Journal of Lipid Research. 2022 Sep 1;63(9).
  25. LaFleur B, White L, Dake MD, Nikolich-Zugich J, Sprissler R, Bhattacharya D. No evidence that analgesic use after COVID-19 vaccination negatively impacts antibody responses. medRxiv. 2022:2022-10. https://doi.org/10.1101/2022.10.14.22281103
  26. Lim JR, Fisher JM, Sadoway D, Gupte R, Nandamuri P, Joseph M, Loveland MG, Guido AA, Madhivanan P, Bedrick EJ, Fantry LE. 2092. Update on PrEP Knowledge and Attitudes Among Adults Attending Public Health Clinics in Southern Arizona. InOpen Forum Infectious Diseases 2022 Dec (Vol. 9, No. Supplement_2, pp. ofac492-1714). US: Oxford University Press.
  27. Liu S, Roemer F, Ge Y, Bedrick E, Li ZM, Guermazi A, Kwoh K, Sun X. Comparison of Evaluation Metrics of Deep Learning for Imbalanced Imaging Data in Osteoarthritis Studies. medRxiv. 2022:2022-09.
  28. Lopez-Galvez N, Claude J, Wong P, Bradman A, Hyland C, Castorina R, Canales RA, Billheimer D, Torabzadeh E, Leckie JO, Beamer PI. Quantification and Analysis of Micro-Level Activities Data from Children Aged 1–12 Years Old for Use in the Assessments of Exposure to Recycled Tire on Turf and Playgrounds. International Journal of Environmental Research and Public Health. 2022 Feb 21;19(4):2483.
  29. Lopez-Pentecost M, Hallmark B, Thomson C, Chilton F, Garcia D. Relationship between fatty acid intake and liver steatosis and fibrosis among overweight and obese Mexican-origin adults. Cancer Research. 2022 Jun 15;82(12_Supplement):5956-.
  30. Lu E, Hara A, Sun S, Hallmark B, Hallmark JM, Seeds MC, Watkins JC, McCall CE, Zhang HH, Yao G, Chilton FH. Temporal Associations of Plasma Levels of the Secreted Phospholipase A2 Family and Mortality in Severe COVID-19. medRxiv. 2022:2022-11.
  31. Mai AS, Lee AR, Tay RY, Shapiro L, Thakkar A, Halmos B, Grinshpun A, Herishanu Y, Benjamini O, Tadmor T, Shroff RT, LaFleur BJ. Booster doses of COVID-19 vaccines for patients with haematological and solid cancer: a systematic review and individual patient data meta-analysis. European Journal of Cancer. 2022 Sep;172:65.
  32. Mathiessen A, Ashbeck EL, Huang E, Bedrick EJ, Kwoh CK, Duryea J. Cartilage Topography Assessment With Local‐Area Cartilage Segmentation for Knee Magnetic Resonance Imaging. Arthritis Care & Research. 2022 Dec;74(12):2013-23.
  33. Moreno Ramírez D, Gutenkunst S, Honan J, Ingram M, Quijada C, Chaires M, Sneed SJ, Sandoval F, Spitz R, Carvajal S, Billheimer D. Thinking on your feet: Beauty and auto small businesses maneuver the risks of the COVID-19 pandemic. Frontiers in Public Health. 2022 Aug 16:2648.
  34. Morrison HW, White MM, Rothers JL, Taylor-Piliae RE. Examining the Associations between Post-Stroke Cognitive Function and Common Comorbid Conditions among Stroke Survivors. International Journal of Environmental Research and Public Health. 2022 Oct 18;19(20):13445.
  35. Mosier JM, Nayebi A, Fisher JM, Subbian V. Predicting Failure of Noninvasive Respiratory Support Using Deep Recurrent Learning. Respiratory Care. 2022 Dec 21.
  36. Narendran N, Palumbo S, Irish J, Lee E, Volpe S, LaFleur B, Chang E. CDHR3 rs6967330 risk allele influences CRS disease severity. Journal of Allergy and Clinical Immunology. 2022 Feb 1;149(2):AB125.
  37. Parker J, Zhang Y, Lafleur BJ, Sun X. Computationally Efficient Kalman Filter Approaches for Fitting Smoothing Splines. InKalman Filter-Engineering Applications2022 Aug 27. IntechOpen.
  38. Patel SI, Zareba W, LaFleur B, Couderc JP, Xia X, Woosley R, Patel IY, Combs D, Mashaqi S, Quan SF, Parthasarathy S. Markers of ventricular repolarization and overall mortality in sleep disordered breathing. Sleep Medicine. 2022 Jul 1;95:9-15.
  39. Perez K, Zareba W, LaFleur B, Xia X, Woosley R, Patel I, Quan S, Grandner M, Youngstedt S, Miller J, Parthasarathy S. 0782 Changes in markers of ventricular repolarization and positive airway pressure therapy: A pilot study. Sleep. 2022 Jun;45(Supplement_1):A340-.
  40. Fardell JE, Bray V, Bell ML, Rabe B, Dhillon H, Vardy JL. Screening for cognitive symptoms among cancer patients during chemotherapy: Sensitivity and specificity of a single item self‐report cognitive change score. Psycho‐Oncology. 2022 Aug;31(8):1294-301.
  41. Ramadan FA, Ellingson KD, Canales RA, Bedrick EJ, Galgiani JN, Donovan FM. Cross-Sectional Study of Clinical Predictors of Coccidioidomycosis, Arizona, USA. Emerging Infectious Diseases. 2022 Jun;28(6):1091.
  42. Schembre SM, Jospe MR, Bedrick EJ, Li L, Brewster AM, Levy E, Dirba DD, Campbell M, Taylor RW, Basen-Engquist KM. Hunger Training as a self-regulation strategy in a comprehensive weight loss program for breast cancer prevention: A randomized feasibility study. Cancer Prevention Research. 2022 Mar 1;15(3):193-201.
  43. Sonar SA, Uhrlaub JL, Coplen CP, Sempowski GD, Dudakov JA, van den Brink MR, LaFleur BJ, Jergović M, Nikolich-Žugich J. Early age–related atrophy of cutaneous lymph nodes precipitates an early functional decline in skin immunity in mice with aging. Proceedings of the National Academy of Sciences. 2022 Apr 26;119(17):e2121028119.
  44. Sridhara S, Gungor AB, Erol HK, Al-Obaidi M, Zangeneh T, Bedrick E, Ariyamuthu V, Shetty A, Qannus AA, Mendoza K, Murugapandian S. Lack of effectiveness of Bebtelovimab Monoclonal Antibody Among High-Risk Patients with SARS-Cov-2 Omicron During BA. 2, BA. 2.12. 1 and BA. 5 Subvariants Dominated Era. medRxiv. 2022:2022-12.
  45. Srinivasan J, Vasudev A, Selden HJ, Perez Jr E, LaFleur B, Sinari SA, Krueger A, Richie ER, Ehrlich LI. An early decline in ETPs reflects reduced pre-thymic progenitors and altered signals from the thymus microenvironment. bioRxiv. 2022 Jan 21:2022-01.
  46. Tanriover B, Gungor AB, Al-Obaidi M, Thajudeen B, Wong R, Mansour I, Zangeneh T, Johnson K, Low N, Alam R, Gonzalez E…Bedrick EJ EFFECTIVENESS OF CASIRIVIMAB-IMDEVIMAB AND SOTROVIMAB MONOCLONAL ANTIBODY TREATMENT AMONG HIGH-RISK PATIENTS WITH SARS-CoV-2 INFECTION: A REAL-WORLD EXPERIENCE. medRxiv. 2022:2022-12.
  47. Vanderpool RR, Hunter KS, Insel M, Garcia JG, Bedrick EJ, Tedford RJ, Rischard FP. The Right Ventricular-Pulmonary Arterial Coupling and Diastolic Function Response to Therapy in Pulmonary Arterial Hypertension. Chest. 2022 Apr 1;161(4):1048-59.
  48. Watanabe M, Jergovic M, Davidson L, LaFleur BJ, Castaneda Y, Martinez C, Smithey MJ, Stowe RP, Haddad EK, Nikolich‐Žugich J. Inflammatory and immune markers in HIV‐infected older adults on long‐term antiretroviral therapy: Persistent elevation of sCD14 and of proinflammatory effector memory T cells. Aging Cell. 2022 Sep;21(9):e13681.
  49. Zanobetti A, Ryan PH, Coull B, Brokamp C, Datta S, Blossom J, Lothrop N, Miller RL, Beamer PI, Visness CM, Andrews H. Childhood asthma incidence, early and persistent wheeze, and neighborhood socioeconomic factors in the ECHO/CREW consortium. JAMA pediatrics. 2022 Aug 1;176(8):759-67.

2021

  1. Akinbami LJ, Petersen LR, Sami S, Vuong N, Lukacs SL, Mackey L, Atas J, LaFleur BJ. Coronavirus Disease 2019 Symptoms and Severe Acute Respiratory Syndrome Coronavirus 2 Antibody Positivity in a Large Survey of First Responders and Healthcare Personnel, May-July 2020. Clin Infect Dis. 2021;73(3):e822-e5. doi: 10.1093/cid/ciab080. PubMed PMID: 33515250; PMCID: PMC7929062.
  2. Borden ES, Adams AC, Buetow KH, Wilson MA, Bauman JE, Curiel-Lewandrowski C, Chow HS, LaFleur BJ, Hastings KT. Shared Gene Expression and Immune Pathway Changes Associated with Progression from Nevi to Melanoma. Cancers (Basel). 2021;14(1). Epub 20211221. doi: 10.3390/cancers14010003. PubMed PMID: 35008167; PMCID: PMC8749980.
  3. Breathett K, Knapp SM, Carnes M, Calhoun E, Sweitzer NK. Imbalance in Heart Transplant to Heart Failure Mortality Ratio by Sex. J Am Heart Assoc. 2021;10(17):e020146. Epub 20210901. doi: 10.1161/jaha.120.020146. PubMed PMID: 34465163.
  4. Breathett K, Knapp SM, Carnes M, Calhoun E, Sweitzer NK. Imbalance in Heart Transplant to Heart Failure Mortality Ratio Among African American, Hispanic, and White Patients. Circulation. 2021;143(24):2412-4.Epub 20210614. doi: 10.1161/circulationaha.120.052254. PubMed PMID: 34125563; PMCID: PMC8208480.
  5. Davidson A, Musiek F, Fisher JM, Marrone N. Investigating the Role of Auditory Processing Abilities in Long-Term Self-Reported Hearing Aid Outcomes among Adults Age 60+ Years. J Am Acad Audiol. 2021;32(7):405-19. Epub 20211130. doi: 10.1055/s-0041-1728771. PubMed PMID: 34847582.
  6. Donovan FM, Ramadan FA, Khan SA, Bhaskara A, Lainhart WD, Narang AT, Mosier JM, Ellingson KD, Bedrick EJ, Saubolle MA, Galgiani JN. Comparison of a Novel Rapid Lateral Flow Assay to Enzyme Immunoassay Results for Early Diagnosis of Coccidioidomycosis. Clin Infect Dis. 2021;73(9):e2746-e53. doi: 10.1093/cid/ciaa1205. PubMed PMID: 32818956.
  7. Fernandez ML, Blomquist SA, Hallmark B, Chilton FH. Omega-3 Supplementation and Heart Disease: A Population-Based Diet by Gene Analysis of Clinical Trial Outcomes. Nutrients. 2021;13(7). Epub 20210623. doi: 10.3390/nu13072154. PubMed PMID: 34201625; PMCID: PMC8308291.
  8. Hale LP, Cheatham L, Macintyre AN, LaFleur B, Sanders B, Troy J, Kurtzberg J, Sempowski GD. T cell-depleted cultured pediatric thymus tissue as a model for some aspects of human age-related thymus involution. Geroscience. 2021;43(3):1369-82. Epub 20210109. doi: 10.1007/s11357-020-00301-1. PubMed PMID: 33420705; PMCID: PMC8190428.
  9. Hallmark B, Wegienka G, Havstad S, Billheimer D, Ownby D, Mendonca EA, Gress L, Stern DA, Myers JB, Khurana Hershey GK, Hoepner L, Miller RL, Lemanske RF, Jackson DJ, Gold DR, O'Connor GT, Nicolae DL, Gern JE, Ober C, Wright AL, Martinez FD. Chromosome 17q12-21 Variants Are Associated with Multiple Wheezing Phenotypes in Childhood. Am J Respir Crit Care Med. 2021;203(7):864-70. doi: 10.1164/rccm.202003-0820OC. PubMed PMID: 33535024; PMCID: PMC8017591.
  10. Hergert DC, Sicard V, Stephenson DD, Pabbathi Reddy S, Robertson-Benta CR, Dodd AB, Bedrick EJ, Gioia GA, Meier TB, Shaff NA, Quinn DK, Campbell RA, Phillips JP, Vakhtin AA, Sapien RE, Mayer AR. Test-Retest Reliability of a Semi-Structured Interview to Aid in Pediatric Traumatic Brain Injury Diagnosis. J Int Neuropsychol Soc. 2021:1-13. Epub 20210811. doi: 10.1017/s1355617721000928. PubMed PMID: 34376268; PMCID: PMC8831656.
  11. Hoyer-Kimura C, Konhilas JP, Mansour HM, Polt R, Doyle KP, Billheimer D, Hay M. Neurofilament light: a possible prognostic biomarker for treatment of vascular contributions to cognitive impairment and dementia. J Neuroinflammation. 2021;18(1):236. Epub 20211015. doi: 10.1186/s12974-021-02281-1. PubMed PMID: 34654436; PMCID: PMC8520282.
  12. Lutrick K, Ellingson KD, Baccam Z, Rivers P, Beitel S, Parker J, Hollister J, Sun X, Gerald JK, Komatsu K, Kim E, LaFleur B, Grant L, Yoo YM, Kumar A, Mayo Lamberte J, Cowling BJ, Cobey S, Thornburg NJ, Meece JK, Kutty P, Nikolich-Zugich J, Thompson MG, Burgess JL. COVID-19 Infection, Reinfection, and Vaccine Effectiveness in a Prospective Cohort of Arizona Frontline/Essential Workers: The AZ HEROES Research Protocol. JMIR Res Protoc. 2021;10(6). Epub 20210526. doi: 10.2196/28925. PubMed PMID: 34057904; PMCID: PMC8386365.
  13. Lutrick K, Rivers P, Yoo YM, Grant L, Hollister J, Jovel K, Khan S, Lowe A, Baccam Z, Hanson H, Olsho LEW, Fowlkes A, Caban-Martinez AJ, Porter C, Yoon S, Meece J, Gaglani M, Burns J, Mayo Lamberte J, Nakayima Miiro F, Bissonnette A, LeClair L, Kutty PK, Romine JK, Stefanski E, Edwards LJ, Ellingson K, Gerald JK, Bedrick EJ, Madhivanan P, Krupp K, Gerald LB, Thompson M, Burgess JL. Interim Estimate of Vaccine Effectiveness of BNT162b2 (Pfizer-BioNTech) Vaccine in Preventing SARS-CoV-2 Infection Among Adolescents Aged 12-17 Years - Arizona, July-December 2021. MMWR Morb Mortal Wkly Rep. 2021;70(5152):1761-5. Epub 20211231. doi: 10.15585/mmwr.mm705152a2. PubMed PMID: 34968373; PMCID: PMC8736269.
  14. Mathiessen A, Ashbeck EL, Huang E, Bedrick EJ, Kwoh CK, Duryea J. Cartilage Topography Assessment with Local Area Cartilage Segmentation (LACS) for Knee MRI. Arthritis Care Res (Hoboken). 2021. Epub 20210705. doi: 10.1002/acr.24745. PubMed PMID: 34219396; PMCID: PMC8727638.
  15. Mosier JM, Fisher JM, Hypes CD, Bedrick EJ, Campbell ES, Lutrick K, Cairns CB. A Target for Increased Mortality Risk in Critically Ill Patients: The Concept of Perpetuity. J Clin Med. 2021;10(17). Epub 20210902. doi: 10.3390/jcm10173971. PubMed PMID: 34501419; PMCID: PMC8432225.
  16. Neill M, Fisher JM, Brand C, Lei H, Sherman SJ, Chou YH, Kuo PH. Practical Application of DaTQUANT with Optimal Threshold for Diagnostic Accuracy of Dopamine Transporter SPECT. Tomography. 2021;7(4):980-9. Epub 20211218. doi: 10.3390/tomography7040081. PubMed PMID: 34941653; PMCID: PMC8706562.
  17. Pu J, Donovan FM, Ellingson K, Leroy G, Stone J, Bedrick E, Galgiani JN. Clinician Practice Patterns That Result in the Diagnosis of Coccidioidomycosis Before or During Hospitalization. Clin Infect Dis. 2021;73(7):e1587-e93. doi: 10.1093/cid/ciaa739. PubMed PMID: 32511677.
  18. Schembre SM, Jospe MR, Bedrick EJ, Li L, Brewster AM, Levy E, Dirba DD, Campbell M, Taylor RW, Basen-Engquist KM. Hunger Training as a self-regulation strategy in a comprehensive weight loss program for breast cancer prevention: a randomized feasibility study. Cancer Prev Res (Phila). 2021. Epub 20211209. doi: 10.1158/1940-6207.Capr-21-0298. PubMed PMID: 34893531.
  19. Schroeder BA, LaFranzo NA, LaFleur BJ, Gittelman RM, Vignali M, Zhang S, Flanagan KC, Rytlewski J, Riolobos L, Schulte BC, Kim TS, Chen E, Smythe KS, Wagner MJ, Mantilla JG, Campbell JS, Pierce RH, Jones RL, Cranmer LD, Pollack SM. CD4+ T cell and M2 macrophage infiltration predict dedifferentiated liposarcoma patient outcomes. J Immunother Cancer. 2021;9(8). doi: 10.1136/jitc-2021-002812. PubMed PMID: 34465597; PMCID: PMC8413967.
  20. Shroff RT, Chalasani P, Wei R, Pennington D, Quirk G, Schoenle MV, Peyton KL, Uhrlaub JL, Ripperger TJ, Jergović M, Dalgai S, Wolf A, Whitmer R, Hammad H, Carrier A, Scott AJ, Nikolich-Žugich J, Worobey M, Sprissler R, Dake M, LaFleur BJ, Bhattacharya D. Immune responses to two and three doses of the BNT162b2 mRNA vaccine in adults with solid tumors. Nat Med. 2021;27(11):2002-11. Epub 20210930. doi: 10.1038/s41591-021-01542-z. PubMed PMID: 34594036.
  21. Shroff RT, Chalasani P, Wei R, Pennington D, Quirk G, Schoenle MV, Peyton KL, Uhrlaub JL, Ripperger TJ, Jergović M, Dalgai S, Wolf A, Whitmer R, Hammad H, Carrier A, Scott AJ, Nikolich-Žugich J, Worobey M, Sprissler R, Dake M, LaFleur BJ, Bhattacharya D. Immune Responses to COVID-19 mRNA Vaccines in Patients with Solid Tumors on Active, Immunosuppressive Cancer Therapy. medRxiv. 2021. Epub 20210514. doi: 10.1101/2021.05.13.21257129. PubMed PMID: 34013289; PMCID: PMC8132263.
  22. Snider JM, You JK, Wang X, Snider AJ, Hallmark B, Zec MM, Seeds MC, Sergeant S, Johnstone L, Wang Q, Sprissler R, Carr TF, Lutrick K, Parthasarathy S, Bime C, Zhang HH, Luberto C, Kew RR, Hannun YA, Guerra S, McCall CE, Yao G, Del Poeta M, Chilton FH. Group IIA secreted phospholipase A2 is associated with the pathobiology leading to COVID-19 mortality. J Clin Invest. 2021;131(19). doi: 10.1172/jci149236. PubMed PMID: 34428181; PMCID: PMC8483752.
  23. Solola S, Luy L, Herrera-Theut K, Zabala L, Torabzadeh E, Bedrick EJ, Yee E, Larsen A, Stone J, McEwen M, Calhoun E, Crist JD, Hebdon M, Pool N, Carnes M, Sweitzer N, Breathett K. Race and Gender-Based Perceptions of Older Adults: Will the Youth Lead the Way? J Racial Ethn Health Disparities. 2021;8(6):1415-23. Epub 20201103. doi: 10.1007/s40615-020-00903-7. PubMed PMID: 33145664; PMCID: PMC8089121.
  24. Tavoian D, Ramos-Barrera LE, Craighead DH, Seals DR, Bedrick EJ, Alpert JS, Mashaqi S, Bailey EF. Six Months of Inspiratory Muscle Training to Lower Blood Pressure and Improve Endothelial Function in Middle-Aged and Older Adults With Above-Normal Blood Pressure and Obstructive Sleep Apnea: Protocol for the CHART Clinical Trial. Front Cardiovasc Med. 2021;8:760203. Epub 20211124. doi: 10.3389/fcvm.2021.760203. PubMed PMID: 34901220; PMCID: PMC8652071.
  25. Vanderpool RR, Hunter KS, Insel M, Garcia JGN, Bedrick EJ, Tedford RJ, Rischard FP. The Right Ventricular-Pulmonary Arterial Coupling and Diastolic Function Response to Therapy in Pulmonary Arterial Hypertension. Chest. 2021. Epub 20211009. doi: 10.1016/j.chest.2021.09.040. PubMed PMID: 34637777.
  26. Yang C, Hallmark B, Chai JC, O'Connor TD, Reynolds LM, Wood AC, Seeds M, Chen YI, Steffen LM, Tsai MY, Kaplan RC, Daviglus ML, Mandarino LJ, Fretts AM, Lemaitre RN, Coletta DK, Blomquist SA, Johnstone LM, Tontsch C, Qi Q, Ruczinski I, Rich SS, Mathias RA, Chilton FH, Manichaikul A. Impact of Amerind ancestry and FADS genetic variation on omega-3 deficiency and cardiometabolic traits in Hispanic populations. Commun Biol. 2021;4(1):918. Epub 20210728. doi: 10.1038/s42003-021-02431-4. PubMed PMID: 34321601; PMCID: PMC8319323.
  27. Yee E, Hosseini SM, Duarte B, Knapp SM, Carnes M, Young B, Sweitzer NK, Breathett K. Sex Disparities in Organ Donation: Finding an Equitable Donor Pool. J Am Heart Assoc. 2021;10(19):e020820. Epub 20210924. doi: 10.1161/jaha.121.020820. PubMed PMID: 34558313.
  28. York LD, Fisher JM, Malladi L, August JA, Ellis KE, Marquez JL, Kaveti A, Khachatryan M, Paz MK, Adams MD, Bedrick EJ, Fantry LE. Antiretroviral Laboratory Monitoring and Implications for HIV Clinical Care in the Era of COVID-19 and Beyond. AIDS Res Hum Retroviruses. 2021;37(4):297-303. Epub 20210317. doi: 10.1089/aid.2020.0263. PubMed PMID: 33567992.